Bioinformatics Lectures
Previous Lecture 4th Lecture Summer Course - Sequence Searching and Analysis II Next Lecture
Start PowerPoint Presentation                        Download PDF File               Download PDF Notes File               Go to LinkPage
  1. Sequence Searching and Analysis II
  2. Analysis of Protein Sequences
  3. An Example for an Online Sequence Analysis Resource
  4. This Package offers many Options
  5. Analyzing three quite distinct Proteins: SP-A, SP-C & CadA
  6. Cut and Paste your sequence into the Input Window
  7. SP-A is a Member of the Lung Surfactant Proteins
  8. CadA of Helicobacter felis is an Ion Export Pump
  9. Simple Statistics reveals Important Differences
  10. Learning French through Protein Analysis ...
  11. Calculating the Isoelectric Point
  12. Analyze the Distribution Pattern of certain Amino Acids
  13. Helicobacter felis CadA
  14. Human SP-A
  15. Looking for Secondary Structure Elements in CadA
  16. This Program presents its Results in Text Forrnat
  1. A Graphically Formatted Program Server
  2. Secondary Structure Elements by Garnier‘s Method
  3. Graphic Output is in BarGraph and PlotGraph Mode
  4. Similar Methods give Similar but not Identical Results
  5. A BLOCKS Search Example
  6. DIGEST Gives You the Proteolytic Peptide Pattern of a Protein
  7. Hydropathy Profile of CadA According to Kyte & Doolittle
  8. Hydrophobicity can be defined via Minima or Maxima
  9. Hydropathy Profile of pre-SP-C (Kyte & Doolittle)
  10. Hydropathy allows Localization of the mature SP-C Sequence
  11. Antigenicity Profile of pre-SP-C according to Welling
  12. Hydropathy and Antigenicity have similar Profiles
  13. ... aligning the SP-C Sequence with the Antigenicity Profile
  14. COG DataBase
  15. The COG Query Input Window (CadA)
  16. Defining CadA - correctly - as a Cation Transport ATPase
  17. From <Almost Identical> to <Barely Related>
 ©    Klaus P. Schäfer - Last Update  05.05.2003